CVE-2026-3408Open Babel CDXML File atom.cpp GetExplicitValence null pointer dereference
- 5.3MediumCVSS base score
- 0.56%Exploitation in 30 daysEPSS · top 53% of all CVEs
- NoKnown exploitednot in CISA's KEV catalog
- YesPublic exploitsa reference or SSVC says so
Description
A vulnerability was identified in Open Babel up to 3.1.1. This impacts the function OBAtom::GetExplicitValence of the file isrc/atom.cpp of the component CDXML File Handler. Such manipulation leads to null pointer dereference. The attack can be launched remotely. The exploit is publicly available and might be used. The name of the patch is e23a224b8fd9d7c2a7cde9ef4ec6afb4c05aa08a. It is best practice to apply a patch to resolve this issue.
Public exploit
An exploit or proof of concept is public: anyone can try it against an unpatched system. A reference of the record is tagged as an exploit. CISA's SSVC rates its exploitation: a proof of concept is public.
Show the exploits1
References tagged exploit1 reference
Timeline
ID reserved
By VulDB
- 1 day later
· 1 day later
Published
Changes after publication (a new score, a public exploit, EPSS crossing 1, 10 or 50 %, leaving KEV) are kept since November 2026; earlier ones are not known.
Scores
| Scored by | CVSS | Score | Vector |
|---|---|---|---|
| VulDBCNA (assigner) | 4.0 | Medium5.3 | CVSS:4.0/AV:N/AC:L/AT:N/PR:N/UI:P/VC:N/VI:N/VA:L/SC:N/SI:N/SA:N/E:P |
| VulDBCNA (assigner) | 3.1 | Medium4.3 | CVSS:3.1/AV:N/AC:L/PR:N/UI:R/S:U/C:N/I:N/A:L/E:P/RL:O/RC:C |
| VulDBCNA (assigner) | 3.0 | Medium4.3 | CVSS:3.0/AV:N/AC:L/PR:N/UI:R/S:U/C:N/I:N/A:L/E:P/RL:O/RC:C |
| VulDBCNA (assigner) | 2.0 | Medium5.0 | AV:N/AC:L/Au:N/C:N/I:N/A:P/E:POC/RL:OF/RC:C |
| NVDNVD · Analyzed | 4.0 | Low2.1 | CVSS:4.0/AV:N/AC:L/AT:N/PR:N/UI:P/VC:N/VI:N/VA:L/SC:N/SI:N/SA:N/E:P/CR:X/IR:X/AR:X/MAV:X/MAC:X/MAT:X/MPR:X/MUI:X/MVC:X/MVI:X/MVA:X/MSC:X/MSI:X/MSA:X/S:X/AU:X/R:X/V:X/RE:X/U:X |
- EPSS (exploitation in 30 days)
- 0.56% · top 53% of all CVEs (14 Nov 2026)
- CISA SSVC
- Exploitation: poc · Automatable: no · Technical impact: partial
The list uses the assigner's score when there is one, then CISA's, then NVD's: Medium 5.3.
Affected products
Open Babel
- affected 3.1.0
- affected 3.1.1
Affected packages
From reviewed advisories of the GitHub Advisory Database.
- PyPIopenbabelGHSA-rxpr-wq63-jr7p (opens in a new tab)
References
References7
- VDB-348303 | Open Babel CDXML File atom.cpp GetExplicitValence null pointer dereference (opens in a new tab)vdb-entrytechnical-description
- VDB-348303 | CTI Indicators (IOB, IOC, IOA) (opens in a new tab)signaturepermissions-required
- Submit #763756 | openbabel Open Babel 3.1.1 and master-branch NULL Pointer Dereference (opens in a new tab)third-party-advisory
- https://github.com/openbabel/openbabel/issues/2848 (opens in a new tab)issue-tracking
- https://github.com/openbabel/openbabel/pull/2862 (opens in a new tab)issue-trackingpatch
- https://github.com/oneafter/0128/blob/main/ob3/repro.cdxml (opens in a new tab)exploit
- https://github.com/VedantMadane/openbabel/commit/e23a224b8fd9d7c2a7cde9ef4ec6afb4c05aa08a (opens in a new tab)patch
Sources
The same CVE in the primary databases and aggregators, to check against.
- CVE.org record (opens in a new tab)
- CVE List JSON (GitHub) (opens in a new tab)
- NVD (opens in a new tab)
- FIRST EPSS (opens in a new tab)
- EUVD EUVD-2026-9141 (opens in a new tab)
- OSV.dev (opens in a new tab)
- GitHub Advisory GHSA-rxpr-wq63-jr7p (opens in a new tab)
- CIRCL Vulnerability-Lookup (opens in a new tab)
Badge for a README or a ticket
[](https://cveledger.app/cve/CVE-2026-3408)Record last updated .